
Bio-informatics platform
The bioinformatics platform of the Mondor Institute for Biomedical Research was created in 2017 to offer the IMRB’s research teams, and more generally the UPEC (Université Paris-Est Créteil) and the outside world :
- Access to computing facilities
Creating an account and a workspace
Access to the calculation means via a schematizer (slurm)
Access to installed software and banks
Ability to install and deploy locally dedicated pipelines and banks.
- Support with bio-informatics analyses
Advice upstream of bio-informatics and/or bio-statistical analyses
Support for bioinformatics analysis and reporting of results
Training and/or assistance
- Bioinformatics expertise
- Example of pipelines/services:
– search for variants
– Genomic meta (16S/WGS)
– ChIP-seq
– RNA-seq
– biological systems modeling
- Equipment :
– 1 compute server composed of 8 16C nodes (64GB RAM per node + GPU) and 4 16C nodes (512GB RAM per node + GPU)
– 1 compute server composed of 2 nodes of 16C and 512 GB RAM per node
– local storage
– 25 TB disk bay
Resources :
The documents for agents provided by the bioinformatics platform can be found here in the data library on the platform’s homepage.
Location :
IMRB-U955
2nd floor of the Créteil Faculty of Medicine
Gate 2037
8 rue du Général SARRAIL
94010 Créteil
Contact: bioinfo.imrb@inserm.fr