Bio-informatics

The bioinformatics platform of the Mondor Institute for Biomedical Research was created in 2017 to offer to the IMRB’s research teams, and more generally the UPEC (Université Paris-Est Créteil) :

• Access to computing facilities:

– Access to the computing power on the cluster via a scheduler (slurm)
– Access to databases and tools already installed
– Possibility to install and deploy locally dedicated pipelines and banks

• Support with bio-informatics analyses:

-Advice upstream of bio-informatics and/or bio-statistical analyses
-Support for bioinformatics analysis and reporting of results
-Training and/or assistance

• Example of pipelines/services:

– Search for variants
– Metagenomics 16S
– ChIP-seq
– RNA-seq

– scRNA-seq

– Biological systems modeling

• Equipment:

– 1 compute server composed of 7 nodes with 16 CPU (32GB RAM per node + GPU) and 7 nodes with 16 CPU (512GB RAM per node)
– Local storage (100To)
– 85To disk (replicated)

Resources :

The documents for agents provided by the bioinformatics platform can be found here in the data library on the platform’s homepage.

Location :
IMRB-U955
3rd floor of the Créteil Faculty of Health, door 318
8 rue du Général SARRAIL, 94010 Créteil

Contact: bioinfo.imrb@inserm.fr